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SDS-PAGE protocol

From Molecular Biology Wiki

Contents

Detailed SDS-PAGE protocol

SDS-PAGE stands for (SDS-Polyacrylamide Gel electrophoresis)

Video shown below of an SDS-PAGE running and separation shown at a fast speed.

Gel electrophoresis is a technique in which an electric current is used to move charged molecules through a gel-like matrix. The direction, distance, and speed of migration are dependent on the size, shape and electrical charge of the molecules and the pore-size of the gel matrix. Gel electrophoresis is routinely used to separate proteins or nucleic acids; specific protocols have been developed for each type of molecule. Common gel materials are agarose (a polysaccharide) and acrylamide (a 3-carbon amide which is polymerized to form long chains with cross-links between the chains). The pore size of the gel is influenced by the percentage of gel material used and, in the case of acrylamide, the amount of cross-linking.

PAGE (polyacrylamide gel electrophoresis) is commonly used to analyze protein samples. SDS-PAGE is a denaturing separation method, since it uses SDS a denaturing detergent.

Materials Needed for SDS-PAGE

  • Molecular Weight Marker
  • 4-20% acrylamide gradient gels
  • Tris-glycine-SDS buffer
  • Practice gel loading solution
  • Marker protein
  • Sample proteins
  • Sealant
  • 50 ml Coomassie Blue Staining Solution
  • De-staining solution (7.5% acetic acid)
The 3 most interesting photos from Flickr for the tag 'sds-page'


Normal day in the lab


20 x 20 cm SDS-PAGE


scary, no?

Equipment Needed for SDS-PAGE

  • Pipette and tips
  • Gel machine
  • Staining box
  • Hot water bath for boiling samples
  • Microfuge
  • Saran wrap

Video of how to clean plates for SDS-PAGE Gel Electrophoresis.

See also: SDS-PAGE and Gel electrophoresis.


Resolving Gel Protocol SDS-PAGE

Watch on the video how to setup your Resolving gel.


SDS


Checking the gel


Stacking Gel Protocol SDS-PAGE



Videos of SDS-PAGE Setup and Assembly

Video of SDS-PAGE gel electrophoresis setup and assembly from BIORAD.


Video of SDS-PAGE gel electrophoresis loading lanes on SDS-PAGE gel.


Running SDS-PAGE Gel

Information and a video on how to run an sds-page gel.


A video demonstrating how to separate the SDS-PAGE gel from the glass plates.


Related SDS-PAGE Articles

SDS-PAGE protocol
 

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