Combining functional and linkage disequilibrium information in the selection of tag SNPs.

Combining functional and linkage disequilibrium information in the selection of tag SNPs. Research Abstract Details 

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Combining functional and linkage disequilibrium information in the selection of tag SNPs. Abstract Text:

P C Sham,S I Ao,J S H Kwan,P Kao,F Cheung,P Y Fong,M K Ng,

We have developed an online program, WCLUSTAG, for tag SNP selection that allows the user to specify variable tagging thresholds for different SNPs. Tag SNPs are selected such that a SNP with user-specified tagging threshold C will have a minimum R2 of C with at least one tag SNP. This flexible feature is useful for researchers who wish to prioritize genomic regions or SNPs in an association study. AVAILABILITY: The online WCLUSTAG program is available at http://bioinfo.hku.hk/wclustag/

Combining functional and linkage disequilibrium information in the selection of tag SNPs. Publishing Authors By Initials

PC Sham,SI Ao,JS Kwan,P Kao,F Cheung,PY Fong,MK Ng,

For similar information science: computing methodologies: software: user-computer interface research abstracts see: information science: computing methodologies: software: user-computer interface research

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Combining functional and linkage disequilibrium information in the selection of tag SNPs. Journal Published:

PUBLICATION TYPE: Research Support, Non-U.S. Gov

Journal: Bioinformatics (Oxford, England)

VOLUME: 23

Page Numbers: 129-31

Journal Abbreviation: Bioinformatics

ISSN: 1460-2059

DAY: 23

MONTH: 10

YEAR: 2006

Combining functional and linkage disequilibrium information in the selection of tag SNPs. Information

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LANGUAGE: eng

NlmUniqueID: 9808944

Combining functional and linkage disequilibrium information in the selection of tag SNPs. Keywords Mesh Terms:

KEYWORDS: User-Computer Interface

MESH TERMS: genetics

Chemical & Substance for Abstract: Combining functional and linkage disequilibrium information in the selection of tag SNPs. Information

Substance Name: Genetic Markers

Registry Number: 0

Grant and Affiliation Information for Combining functional and linkage disequilibrium information in the selection of tag SNPs.

AFFILIATION: Department of Psychiatry, Institute of Psychiatry, King's College London, UK.

Country: England

AGENCY: United States NEI

GRANT: EY-12562

ACRONYM: EY

MEDLINETA: Bioinformatics

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