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Assessment of intramolecular contact predictions for CASP7.

Assessment of intramolecular contact predictions for CASP7. Research Abstract Details 

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  • Assessment of intramolecular contact predictions for CASP7. Abstract Text:

     izarzugaza Izarzugaza,osvaldo Osvaldo ,michael l tressMichael L Tress,alfonso valenciaAlfonso Valencia,neil d clarkeNeil D Clarke, izarzugaza Izarzugaza,osvaldo Osvaldo ,michael l tressMichael L Tress,alfonso valenciaAlfonso Valencia,neil d clarkeNeil D Clarke,

    Predictions of intramolecular residue-residue contacts were assessed as part of the seventh community-wide Critical Assessment of Structure Prediction experiment (CASP7). As in past assessments, we focused on contacts that lie far apart in sequence as these are likely to be more informative in predicting protein structure. One lab did somewhat better than others according to our assessment, and there is some reason to think that this lab's results represent progress over CASP6. In general, contacts inferred from 3D structural predictions are similar in accuracy to those predicted by contact prediction methods. However, contact prediction methods were more accurate for some targets.

    Assessment of intramolecular contact predictions for CASP7. Publishing Authors By Initials

    jm izarzugazaJM Izarzugaza,o O ,ml tressML Tress,a valenciaA Valencia,nd clarkeND Clarke,jm izarzugazaJM Izarzugaza,o O ,ml tressML Tress,a valenciaA Valencia,nd clarkeND Clarke,

    For similar abstracts research abstracts see: abstracts research

    PUBMED ID PMID:

    MEDLINE DATE:

    Assessment of intramolecular contact predictions for CASP7. Journal Published:

    PUBLICATION TYPE: Research Support, Non-U.S. Gov

    Journal: Proteins

    VOLUME: 69 Suppl 8

    Page Numbers: 152-8

    Journal Abbreviation: Proteins

    ISSN: 1097-0134

    DAY: 27

    MONTH: 11

    YEAR: 2007

    Assessment of intramolecular contact predictions for CASP7. Information

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    LANGUAGE: eng

    NlmUniqueID: 8700181

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    Grant and Affiliation Information for Assessment of intramolecular contact predictions for CASP7.

    AFFILIATION: Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre, 3E-28029 Madrid, Spain.

    Country: United States

    United States Research PublicationUnited States Research Publication

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    MEDLINETA: Proteins

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