Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas.

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Research Abstract Details 

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Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Abstract Text:

Nichole L King,Eric W Deutsch,Jeffrey A Ranish,Alexey I Nesvizhskii,James S Eddes,Parag Mallick,Jimmy Eng,Frank Desiere,Mark Flory,Daniel B Martin,Bong Kim,Hookeun Lee,Brian Raught,Ruedi Aebersold,

We present the Saccharomyces cerevisiae PeptideAtlas composed from 47 diverse experiments and 4.9 million tandem mass spectra. The observed peptides align to 61% of Saccharomyces Genome Database (SGD) open reading frames (ORFs), 49% of the uncharacterized SGD ORFs, 54% of S. cerevisiae ORFs with a Gene Ontology annotation of 'molecular function unknown', and 76% of ORFs with Gene names. We highlight the use of this resource for data mining, construction of high quality lists for targeted proteomics, validation of proteins, and software development.

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Publishing Authors By Initials

NL King,EW Deutsch,JA Ranish,AI Nesvizhskii,JS Eddes,P Mallick,J Eng,F Desiere,M Flory,DB Martin,B Kim,H Lee,B Raught,R Aebersold,

For similar information science: computing methodologies: software: user-computer interface research abstracts see: information science: computing methodologies: software: user-computer interface research

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Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Journal Published:

PUBLICATION TYPE: Research Support, N.I.H., Extr

Journal: Genome biology

VOLUME: 7

Page Numbers: R106

Journal Abbreviation: Genome Biol.

ISSN: 1465-6914

DAY: 3

MONTH: 12

YEAR: 2006

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Information

Number of References:

LANGUAGE: eng

NlmUniqueID: 100960660

Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Keywords Mesh Terms:

KEYWORDS: User-Computer Interface

MESH TERMS: metabolism

Chemical & Substance for Abstract: Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas. Information

Substance Name: Saccharomyces cerevisiae Proteins

Registry Number: 0

Grant and Affiliation Information for Analysis of the Saccharomyces cerevisiae proteome with PeptideAtlas.

AFFILIATION: Institute for Systems Biology, N 34th Street, Seattle, WA 98103, USA. nking@systemsbiology.org

Country: England

AGENCY: United States NHLBI

GRANT: N01-HV-28179

ACRONYM: HV

MEDLINETA: Genome Biol

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