A simple way to compute protein dynamics without a mechanical model.

A simple way to compute protein dynamics without a mechanical model. Research Abstract Details 

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A simple way to compute protein dynamics without a mechanical model. Abstract Text:

Chien-Hua Shih,Shao-Wei Huang,Shih-Chung Yen,Yan-Long Lai,Sung-Huan Yu,Jenn-Kang Hwang,Chien-Hua Shih,Shao-Wei Huang,Shih-Chung Yen,Yan-Long Lai,Sung-Huan Yu,Jenn-Kang Hwang,

We found that in proteins the average atomic fluctuation is linearly related to the square of the atomic distance from the center of mass of the protein. Using this simple relation, we can accurately compute the temperature factors of proteins of a wide range of sizes and folds, and the correlation of the fluctuations in proteins. This simple relation provides a direct link between protein dynamics and the static protein's geometrical shape and offers a simple way to compute protein dynamics without either long time trajectory integration or any matrix operations.

A simple way to compute protein dynamics without a mechanical model. Publishing Authors By Initials

CH Shih,SW Huang,SC Yen,YL Lai,SH Yu,JK Hwang,CH Shih,SW Huang,SC Yen,YL Lai,SH Yu,JK Hwang,

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A simple way to compute protein dynamics without a mechanical model. Journal Published:

PUBLICATION TYPE: Research Support, Non-U.S. Gov

Journal: Proteins

VOLUME: 68

Page Numbers: 34-8

Journal Abbreviation: Proteins

ISSN: 1097-0134

DAY: 1

MONTH: Jul

YEAR: 2007

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LANGUAGE: eng

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Grant and Affiliation Information for A simple way to compute protein dynamics without a mechanical model.

AFFILIATION: Institute of Bioinformatics, National Chiao Tung University, HsinChu 30050, Taiwan, Republic of China.

Country: United States

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MEDLINETA: Proteins

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