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RNAi and SiRNA Forum Discuss and Post Questions in this forum about RNA interference and siRNA. RNAi and siRNA transfection, inhibition of endogenous genes, and miRNA and shRNA.


siRNA design websites and databases

siRNA design websites and databases - RNAi and SiRNA Forum

siRNA design websites and databases - Discuss and Post Questions in this forum about RNA interference and siRNA. RNAi and siRNA transfection, inhibition of endogenous genes, and miRNA and shRNA.


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Old 11-10-2007, 04:24 AM
Pipette Filler
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Default siRNA design websites and databases



I am looking to generate a small shRNA library and have been searching using various siRNA design engines... oligo engine, RNAi codex (Hannon library), broad institute / Whitehead... Does anyone know whether one is better than the other or if any one has ever compared the sequences generated by different engines? Do they yield the same sequences / use the same rules for generating sequences?

Thank you for your help.
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