script to scan through a fasta file of miRNA sequences based on particular features
 

Hi
i have two questions:
1.Is there a way of scanning through a fasta file of about 700 miRNA sequences and classify these sequences based on some features e.g. MFE and A:C mismatch ?

2. with the same fasta file above, how can i use python to read them one by one and assign them as input to RNAfold.exe and display the output result?

hope someone knows what am talking about.

Re: script to scan through a fasta file of miRNA sequences based on particular featur
 

please,guys! i need your help. if my questions are not clear enough let me know :(