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-   -   hsa-mir-XXX extraction from a fasta file (http://www.molecularstation.com/forum/rna-forum/84954-hsa-mir-xxx-extraction-fasta-file.html)

rebekka 03-19-2012 04:22 PM

hsa-mir-XXX extraction from a fasta file
 
hi guys!

i am using Biopython. i got this hairpin.fa file containing all types of miRNAs with id,name and sequences. now i am only interested in the homosapien miRNAs. could someone tell me how to extract them form the file.?

i had wanted to attach the file here but the upload failed. so please go to the link below and download the file "hairpin.fa"

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please help me.i am new in using python and moreover biopython :( !!

rebekka 03-20-2012 01:52 PM

Re: hsa-mir-XXX extraction from a fasta file
 
problem solved :)


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