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software for making a model of a protein

software for making a model of a protein - Protocols and Methods Forum

software for making a model of a protein - Post Any Protocol, Method, Technique, Procedure or Tips / Troubleshooting for any Molecular Biology Technique.


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Old 05-05-2007, 03:24 AM
DK
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Default software for making a model of a protein



In article <[Only registered users see links. ].net >, Maryam <[Only registered users see links. ]> wrote:

Yes. In this case the simplest is to get Coot (google it), load your four
PDBs, use rotate/translate zone on each (after selecting first and last
residue) to make your model, save the result, load the result into
Pymol (google it) and Pymol will make a pretty pic for you.

Obviously, there is some learning curve involved. The easier
solution would be to find a crystallographer who can spend an hour
with you making a model and a picture of it. (Although be prepared
for some unpleasant comments about the value of the model
obtained this way).

DK
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