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#1
07-14-2006, 07:01 AM
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 Upstream of gene of interest Hi Debashish, You can do this very easily. Upload your sequence in Mascon's EXOME or any other sequence viewer, access the region you want,copy that sequence, put it in any MSA package, say, Clustal W or Qalign orEXOME. Similarly, take other sequences with which you want to check for conserved patterns, Copy them and hop them along with the previous sequence in any Multiple sequence alignment package and run MSA. you will detect motifs, if any. Many Regards, Tarun Tarun Gupta Summer Trainee Regional Research laboratory (CSIR) Jammu B.Sc.(hons)Bioinformatics GGDSD College of Post Graduation (Panjab University) Sector-32/C Chandigarh-160031 Mob: +91-9888237906 [Only registered users see links. ] [Only registered users see links. ]  |
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| gene , interest , upstream |
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