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#1
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| hi guys, i am working with a protein which is 10kda.i am not able see a band at the expected region in westernblotting-things which i hav used 1.amersham ECL NCM -poresize 2u 2.0.1%SDS in blot buffer 3..63A for 30-45 min 4.0.3% Tween-20 in PBS for wasing and blocking plz suggest me few things abt were i am going wrong. [Only registered users see links. ] |
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#2
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| In article <[Only registered users see links. ]>, [Only registered users see links. ] wrote: As you don't mention controls, it is impossible to eliminate any of the zillion possible reasons. However, my first reaction is that the culprit is 0.1% SDS. 10 kDa is small enough to run through membrane. On the other hand, at least something should have remain bound, so you are also might have problem with sensitivity. DK |
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#3
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| <[Only registered users see links. ].uk> wrote in message news:[Only registered users see links. ]... expected region in westernblotting-things which i hav used [Only registered users see links. ] First thing I would try is loading more protein on the gel. Then, higher concentration of the antibody. Do you see other proteins being transferred to the membrane? You can quickly stain/destain the membrane using SDS-PAGE Coomassie staining solution. If you don't see protein bands, that means the transfer did not happen (wrong membrane?). Usually, TBS or PBS with 0.1% Tween-20 works fine. 5-50 ng of protein per lane, 1/10000-1/500 dilution of 0.2 mg/ml antibody are the usual working ranges. One more IMPORTANT thing in case nothing works: your antibody may recognize the protein in native, folded state and would not recognize the denatured, linear protein. Solution: try another antibody (e.g., one raized against terminal peptide sequences of the protein). As a last resort, in case another antibody is not available, you may try renaturing the protein right on the membrane (depends on whether your protein is a monomer in nature). There must be methods for doing this somewhere out there, although I never tried it myself. Generally, you would do the same thing as for in-solution renaturation. -Emir |
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| bands , blotting , western |
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