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what the best condition of PCR

what the best condition of PCR - PCR - Polymerase Chain Reaction Forum

what the best condition of PCR - PCR - Polymerase Chain Reaction Forum. Discuss and ask questions about PCR troubleshooting, PCR protocols and methods, PCR products, and PCR theory.


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Old 07-19-2011, 02:50 PM
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Default what the best condition of PCR



Hi everybody, I am really need help.
this first time I work with PCR
I have specific primers that have 70% GC rich of forward
and for reveres primer is 64.8%
How I know the best condition of PCR to amplify my target gene.
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Old 07-20-2011, 04:24 AM
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Default Re: what the best condition of PCR

You can calculate the melting temperature (Tm) of your primers with this formula:

Tm = (2ºC x no. of A+T) + (4ºC x no. of G+C)

You can take the average Tm of your primers to start standarizing.

Good luck
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Old 07-29-2011, 11:05 PM
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Default Re: what the best condition of PCR

You can simulate the PCR reation in this site: http : / / www . idtdna . com / analyzer / applications / oligoanalyzer /
(/\ erase the spaces on the link, because i'm new here and i cant post links)
Analise the primers once by time looking yours features, the concentration of reagents and others parameters.
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