I have a very big and complex question for you. I want to collect the modern requirements for the greatest sequence alignment editor in the world.
Everybody uses some popular editors, for example JalView, UGENE MSA Editor, BioEdit and other ones. But I think that each person has some own wishes which he/she wants to add into the used tools. Some people resolve such problems using several tools simultaneously (e.g. browser + editor help to fetch sequences from public databases and work with them; or some editor could have a great alignment viewer and another one has a very useful tree viewer). But the handiest way is to have all features available "from the box", collected in one application.
Could you tell me, please, what functionality and usability things you would want to have in the greatest sequence alignment editor in the world?
Thanks a lot!