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Blast and fasta

Blast and fasta - Bioinformatics

Blast and fasta - Have questions about bioinformatic tools or databases? Post questions here. Discuss and post interesting bioinformatics information.


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Old 10-26-2011, 10:06 PM
Pipette Filler
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Default Blast and fasta



HI,
I would like to know how make my sequences with BLAST OR FASTA format?
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Old 11-24-2011, 04:24 PM
Pipette Filler
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Default Re: Blast and fasta

Actually there is no file format called BLAST, BLAST is an alignment tool.
To make FASTA files, use the ">" symbol followed by the name of the sequence, and on the next line paste your sequence, and save the file with an extension .fasta

eg :

>exampleSequence
YYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSA IPYIGTNLV
EWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGL TSDSDKIPFHPYYTIKDFLG
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