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-   -   what is the motivation? (http://www.molecularstation.com/forum/bioinformatics/83737-what-motivation.html)

huda 10-08-2011 02:03 PM

what is the motivation?
 
hi, what is the motivation of multiple sequence alignment?

thanks

maria87 03-15-2012 08:51 PM

Re: what is the motivation?
 
This reply might be late but I thought someone else might benefit.

- Multiple sequence alignment can find biologically important sequence similarities that may be widely dispersed or hidden in the sequences
- Multiple sequence alignment can provide information about the evolutionary history of the respective sequences
- Multiple sequence alignment can give insight into the basis for sequence similarities between homologous sequence

huda 03-18-2012 02:46 PM

Re: what is the motivation?
 
Quote:

Originally Posted by maria87 (Post 439116)
This reply might be late but I thought someone else might benefit.

- Multiple sequence alignment can find biologically important sequence similarities that may be widely dispersed or hidden in the sequences
- Multiple sequence alignment can provide information about the evolutionary history of the respective sequences
- Multiple sequence alignment can give insight into the basis for sequence similarities between homologous sequence

many thanks, because you late, i looked for these information and know it .
but , it is good to ask another question.
if i have set of sequences and want to find out the similarity among them, what is the best wat to use pairewise o multiple sequence?

thanks again


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