Inference engine for computermodels

[cor]

Hi all,

I am interested in building computermodels about gene/protein interaction networks, using reverse engineering on microarray data. This approach is for example used by the company Gene Network Sciences to find potential targets for drugs (1). They have developed a proprietary inference engine for this goal. In this engine existing knowledge is used to guide (further) inferencing.

Do you know of any public domain initiative to develop such a engine and/or
do you have any experience with it?

Thank you for your reply in advance!

Cor Lieftink

(1) [Only registered users see links. ]

[kiki06]

Hi Cor!,

I have seen some interference papers that look at genome-wide screens.
see

[Only registered users see links. ]

Also, I think using microarray is the method for the future.

Good luck with the method!
Kiki

[ashish]

Can anyone help me about Protein microarray data analysis. What sort of data is received by the experimentalist. I am interested in developing a software for the same purpose.