NCBI Geo Database & GEOQuery
I am trying to analyze the gene expression data from NCBI GEO website
(Please replace xxx by www and xttp by http)
locally. I have downloaded the GDS SOFT format files and am using GEOquery/BioConductor tool to query them.
I want to find list of all the genes specifically upregulated in a particular disease.
I don't want to use the E-utils or any remote utilities for this.
Any help is appreciated.
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