Go Back   Molecular Biology Forum > Molecular Research Topics Forum > Bioinformatics
Register Blogs FAQ Members List Calendar Science Groups New! Arcade Search Today's Posts Mark Forums Read

Bioinformatics Have questions about bioinformatic tools or databases? Post questions here. Discuss and post interesting bioinformatics information.


Problem with DCNP1 annotation

Bioinformatics

Have questions about bioinformatic tools or databases? Post questions here. Discuss and post interesting bioinformatics information.



Register Molecular Biology Forums
Reply
 
LinkBack Thread Tools Display Modes
  #1 (permalink)  
Old 09-18-2007, 07:36 AM
Pipette Filler
Points: 812, Level: 16Points: 812, Level: 16Points: 812, Level: 16
Activity: 0%Activity: 0%Activity: 0%
 

Join Date: Mar 2007
Posts: 2
amitpande74 RSS Feed
Default Problem with DCNP1 annotation

Dear All,
Sometimes it is very difficult to understand what the NCBI annotation staff does.
I am currently working on this protein DCNP1, the database records for the
accession number NP_570900 says it is an intronless gene.("This intronless gene is specifically expressed in dendritic cells (DCs), which are potent antigen-presenting cells involved in activating naive T cells to initiate antigen-specific immune response. The encoded protein is localized mainly in the perinucleus. One of the alleles (A/T) of this gene, that causes premature
translation termination at aa 117, has been associated with an increased prevalence of major depression in humans."
If one follows this trail and goes to the SWISSPROT ID Q8TF63 and the
details thereby to ENSEMBL entry for the same gene ENSG0000185555,in
the exon information the information that is shown is that gene is not
intronless and the sequence can be seen in the mentioned database.
Kindly suggest some measures to look into this matter.
Digg this Post!Add Post to del.icio.usBookmark Post in TechnoratiFurl this Post!Spurl this Post!Reddit!
Reply With Quote
Alt Today
Advertising
Google Adsense
 
This advertising will not be shown
in this way to registered members.
Register your free account today
and become a member on
Molecular Biology Forum
Standard Sponsored Links

Reply

Tags
annotation , dcnp1 , problem

Thread Tools
Display Modes

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are On
Pingbacks are On
Refbacks are On
Forum Jump

Similar Threads
Thread Thread Starter Forum Replies Last Post
IEF problem: the tracking dye did not migrate during the run. ay_sh Proteomics Forum 1 10-10-2007 04:02 PM
2D gel running problem cosmis85 Proteomics Forum 2 05-25-2007 06:41 AM
2D gel running problem cosmis85 Protocols and Methods Forum 0 02-21-2007 09:08 AM
First Dimension Problem For 2d Gel kauliteen Proteomics Forum 1 12-19-2006 06:52 AM
2D PAGE problem antheab Peptide Forum 2 11-20-2006 11:13 AM


All times are GMT. The time now is 12:50 PM.


Powered by vBulletin® Version 3.7.1
Copyright ©2000 - 2008, Jelsoft Enterprises Ltd.
Copyright 2005-2007 Molecular Station | All Rights Reserved