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[Arabidopsis] cis element analysis

[Arabidopsis] cis element analysis - Arabidopsis and Plant Biology

[Arabidopsis] cis element analysis - Discuss Arabidopsis and Plant Biology Research.


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Old 10-04-2008, 05:07 PM
Robert H. Gross
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Default [Arabidopsis] cis element analysis



--- You wrote:
Hi,

Is there anybody who can give me some suggestions how to analyze the cis-
element in the promoter region?

Any suggestions are appreciated.

Thanks!

Jianling
--- end of quote ---
Hello Jianling -

Your note was forwarded to me from a colleague. My lab has developed something
to do exactly this called SCOPE. You can access it at: <http://genie.dartmouth.edu/scope/>.

It is designed to find common regulatory elements for any set of genes that you
input to the server. There are references to papers on the genie server.

Please let me know if you have any questions or would like to talk about your
questions. I'm always open to new collaborations.

Good luck.

Bob Gross

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Robert H. Gross, Ph.D. phone: 603-646-2059
Assoc. Prof., Dept. Biology email: [Only registered users see links. ]
Director, Ctr. for Biol. & Biomed. Computing Office: Remsen 210
Gilman Labs 104 URL: [Only registered users see links. ]
Dartmouth College
Hanover, NH 03755 USA

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