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[Arabidopsis] How many complete plant genome sequences are there?

[Arabidopsis] How many complete plant genome sequences are there? - Arabidopsis and Plant Biology

[Arabidopsis] How many complete plant genome sequences are there? - Discuss Arabidopsis and Plant Biology Research.


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Old 03-15-2006, 05:36 AM
Carl Douglas
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Default [Arabidopsis] How many complete plant genome sequences are there?



Rob,

The 480 mb genome sequence of poplar (Populus trichocarpa) can be viewed and
is briefly described at:
[Only registered users see links. ]
This was a collaborative project, with most of the data generated by the US
DOE (JGI/ORNL), University of British Columbia/Vancouver Genome Sciences
Centre, Umea (Sweden) Plant Science Center, and University of Gent
Bioinformatics & Evolutionary Genomics group. Others were involved in gene
annotation, EST sequencing, etc.

This is currently the only completed plant sequence in addition to
Arabidopsis and rice.

A manuscript describing the poplar sequence and its analysis is in
preparation, but this will probably be too late for your paper. You might
want to check out a recent paper on Populus ESTs (Sterck et al. 2005. New
Phytol. 167:165-70) from which inferences on poplar genome evolution are
made.

Carl Douglas
----------------
Carl J. Douglas
Professor and Head
Department of Botany
6270 University Blvd.
University of British Columbia
Vancouver, BC V6T 1Z4
CANADA
Phone604) 822-3554
FAX: (604) 822-6089
email: [Only registered users see links. ]




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