Protein Identification Tools

AACompIdent AACompIdent. Identify a protein by its amino acid...

AACompSim tool AACompSim is a tool which allows the comparison of the...

Aldente Aldente. Identify proteins with peptide mass...

CysView CysView takes as input various annotated formats of...

FindMod Predict potential protein post-translational...

FindPept Identify peptides that result from unspecific cleavage of...

GDAP The Genomic Disulfide Analysis Program (GDAP) predicts...

GlycoMod Predict possible oligosaccharide structures that occur on...

IsotopIdent IsotopIdent. Predicts the theoretical isotopic...

LINKER LINKER is a tool for designing linker peptide sequences...

Mascot Mascot. Peptide mass fingerprint, sequence query and...

MultiIdent MultiIdent. Identify proteins with pI, Mw, amino acid...

OMSSA OMSSA. MS/MS peptide spectra identification by searching...

PepMAPPER PepMAPPER. Peptide mass fingerprinting tool from UMIST, UK.

PepSea. PepSea. Protein identification by peptide mapping or...

Peptide Mass Peptide Mass. Calculate masses of peptides and their...

Peptidecutter Peptide cutter. Predicts potential protease and cleavage...

PeptideMass Cleaves a protein sequence with a chosen enzyme and...

PFMUTS PFMUTS. Shows the possible single and double mutations of...

Phenyx Phenyx. Protein and peptide...

ProFound. Pro Found is Proteometrics search engine for obtaining...

ProteinInfo Protein Info is Proteometrics search engine obtaining...

ProteinProspector Protein Prospector. A variety of tools from UCSF (MS-Fit,...

ProtParam Compute molecular weight, theoretical pI, amino acid...

PROWL PROWL. Protein chemistry and mass spectrometry resource...

Qgrid Server which provides cluster tree diagrams of a protein...

Sonar MS/MS Search Engine. Sonar MS/MS Search Engine is Proteometrics search engine...

TagIdent Tag Ident. Identify proteins with pI, Mw and sequence...

The Amino Acid Repository Includes chemical structures and properties, solvent...