Current Gene Annotations. Table of downloads of several species - gene products have been annotated to the gene ontologies by collaborating groups. A gene product can have one or more molecular functions, be used in one or more biological processes and ma - [Read more Current Gene Annotations]
Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating these interactions with gene expression profiles and other state data. - [Read more Cytoscape]
AmiGO allows you to search for a GO term and view all gene products annotated to it, or search for a gene product and view all its associations. You can also browse the ontologies to view relationships between terms as well as the number of gene products - [Read more AmiGO]
DAG-Edit or OBO-Edit- http://www.godatabase.org/dev/java/dagedit/docs/index.html
Java application providing an interface to browse, query DAG data structure. The most current version of DAG-Edit can be downloaded from the publicly accessible free open source repository at SourceForge. - [Read more DAG-Edit or OBO-Edit]